Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

GCT Seminoma Korkola Cluster Number 89 (47 genes) This page contains all miRNA mediated regulation and functional enrichment for GCT Seminoma Korkola cluster number 89. Information about seminoma can be found on Wikipedia, and further information about the "GCT Seminoma Korkola" dataset can be found in Korkola et al., 2006. Inferred miRNA Mediated Regulation Weeder-miRvestigator PITA TargetScan zzz999 hsa-mir-568 hsa-mir-1257 Gene Ontology Enrichment GO ID GO Term Annotated Genes in Cluster GO:0003002 regionalization 7 GO:0007275 multicellular organismal development 24 GO:0007389 pattern specification process 10 GO:0007399 nervous system development 18 GO:0007417 central nervous system development 12 GO:0007420 brain development 10 GO:0007423 sensory organ development 7 GO:0009952 anterior/posterior pattern formation 7 GO:0021871 forebrain regionalization 3 GO:0021954 central nervous system neuron development 3 GO:0022008 neurogenesis 12 GO:0030154 cell differentiation 20 GO:0030182 neuron differentiation 11 GO:0030900 forebrain development 7 GO:0032501 multicellular organismal process 28 GO:0032502 developmental process 24 GO:0043010 camera-type eye development 5 GO:0045449 regulation of transcription, DNA-dependent 19 GO:0045666 positive regulation of neuron differentiation 3 GO:0048468 cell development 12 GO:0048513 organ development 17 GO:0048593 camera-type eye morphogenesis 4 GO:0048699 generation of neurons 11 GO:0048731 system development 23 GO:0048856 anatomical structure development 24 GO:0048869 cellular developmental process 20 Overlap Between miRNA Target Genes and Enriched Gene Ontology Annotations miRNA Method GO ID GO Term Overlap GO Annotated Genes Cluster Size miRNA Targets Genes P-Value hsa-mir-1257 TargetScan GO:0003002 regionalization 3 7 47 18 0.2421635 hsa-mir-568 PITA GO:0003002 regionalization 2 7 47 8 0.08408739 hsa-mir-1257 TargetScan GO:0007275 multicellular organismal development 9 24 47 18 0.426915 hsa-mir-568 PITA GO:0007275 multicellular organismal development 7 24 47 8 0.002338857 hsa-mir-1257 TargetScan GO:0007389 pattern specification process 4 10 47 18 0.3078197 hsa-mir-568 PITA GO:0007389 pattern specification process 3 10 47 8 0.05079171 hsa-mir-1257 TargetScan GO:0007399 nervous system development 7 18 47 18 0.352577 hsa-mir-568 PITA GO:0007399 nervous system development 7 18 47 8 0.0001391539 hsa-mir-1257 TargetScan GO:0007417 central nervous system development 5 12 47 18 0.264743 hsa-mir-568 PITA GO:0007417 central nervous system development 5 12 47 8 0.00183807 hsa-mir-1257 TargetScan GO:0007420 brain development 5 10 47 18 0.1113191 hsa-mir-568 PITA GO:0007420 brain development 5 10 47 8 0.0004590287 hsa-mir-1257 TargetScan GO:0007423 sensory organ development 3 7 47 18 0.2421635 hsa-mir-568 PITA GO:0007423 sensory organ development 3 7 47 8 0.01084926 hsa-mir-1257 TargetScan GO:0009952 anterior/posterior pattern formation 3 7 47 18 0.2421635 hsa-mir-568 PITA GO:0009952 anterior/posterior pattern formation 2 7 47 8 0.08408739 hsa-mir-1257 TargetScan GO:0021871 forebrain regionalization 2 3 47 18 0.05032377 hsa-mir-568 PITA GO:0021871 forebrain regionalization 0 3 47 8 0.4363861 hsa-mir-1257 TargetScan GO:0021954 central nervous system neuron development 3 3 47 18 0.0 hsa-mir-568 PITA GO:0021954 central nervous system neuron development 2 3 47 8 0.003453592 hsa-mir-1257 TargetScan GO:0022008 neurogenesis 6 12 47 18 0.09597676 hsa-mir-568 PITA GO:0022008 neurogenesis 7 12 47 8 1.57414e-06 hsa-mir-1257 TargetScan GO:0030154 cell differentiation 7 20 47 18 0.5370336 hsa-mir-568 PITA GO:0030154 cell differentiation 7 20 47 8 0.0004005947 hsa-mir-1257 TargetScan GO:0030182 neuron differentiation 6 11 47 18 0.0537852 hsa-mir-568 PITA GO:0030182 neuron differentiation 7 11 47 8 5.247132e-07 hsa-mir-1257 TargetScan GO:0030900 forebrain development 4 7 47 18 0.06437735 hsa-mir-568 PITA GO:0030900 forebrain development 4 7 47 8 0.0006772934 hsa-mir-1257 TargetScan GO:0032501 multicellular organismal process 11 28 47 18 0.3191704 hsa-mir-568 PITA GO:0032501 multicellular organismal process 8 28 47 8 0.0 hsa-mir-1257 TargetScan GO:0032502 developmental process 9 24 47 18 0.426915 hsa-mir-568 PITA GO:0032502 developmental process 7 24 47 8 0.002338857 hsa-mir-1257 TargetScan GO:0043010 camera-type eye development 2 5 47 18 0.279414 hsa-mir-568 PITA GO:0043010 camera-type eye development 2 5 47 8 0.02886816 hsa-mir-1257 TargetScan GO:0045449 regulation of transcription, DNA-dependent 8 19 47 18 0.2268853 hsa-mir-568 PITA GO:0045449 regulation of transcription, DNA-dependent 5 19 47 8 0.03734159 hsa-mir-1257 TargetScan GO:0045666 positive regulation of neuron differentiation 1 3 47 18 0.3239593 hsa-mir-568 PITA GO:0045666 positive regulation of neuron differentiation 2 3 47 8 0.003453592 hsa-mir-1257 TargetScan GO:0048468 cell development 6 12 47 18 0.09597676 hsa-mir-568 PITA GO:0048468 cell development 7 12 47 8 1.57414e-06 hsa-mir-1257 TargetScan GO:0048513 organ development 7 17 47 18 0.2673124 hsa-mir-568 PITA GO:0048513 organ development 5 17 47 8 0.01905285 hsa-mir-1257 TargetScan GO:0048593 camera-type eye morphogenesis 2 4 47 18 0.1498276 hsa-mir-568 PITA GO:0048593 camera-type eye morphogenesis 1 4 47 8 0.1289603 hsa-mir-1257 TargetScan GO:0048699 generation of neurons 6 11 47 18 0.0537852 hsa-mir-568 PITA GO:0048699 generation of neurons 7 11 47 8 5.247132e-07 hsa-mir-1257 TargetScan GO:0048731 system development 9 23 47 18 0.339213 hsa-mir-568 PITA GO:0048731 system development 7 23 47 8 0.001559238 hsa-mir-1257 TargetScan GO:0048856 anatomical structure development 9 24 47 18 0.426915 hsa-mir-568 PITA GO:0048856 anatomical structure development 7 24 47 8 0.002338857 hsa-mir-1257 TargetScan GO:0048869 cellular developmental process 7 20 47 18 0.5370336 hsa-mir-568 PITA GO:0048869 cellular developmental process 7 20 47 8 0.0004005947

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.